STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL35743.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (463 aa)    
Predicted Functional Partners:
AKL38737.1
LamB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.714
AKL36621.1
LamB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.714
AKL36371.1
LpxA-like enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.639
AKL35807.1
Invasin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.620
AKL34963.1
Tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
yjjQ
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
AKL36554.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
AKL34966.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
AKL33738.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
AKL34758.1
4-hydroxybenzoate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.