Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKL36264.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
AKL36262.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.853
AKL36263.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.810
AKL34972.1
Phage tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.702
AKL36836.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.692
AKL36829.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.678
AKL36837.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.670
AKL37547.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.649
AKL38247.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.647
AKL36834.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.644
AKL36844.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.623
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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