STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL36269.1Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
AKL36268.1
Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.964
AKL36270.1
Phage tail assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.913
AKL34967.1
Phage minor tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.858
AKL34972.1
Phage tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.852
AKL34968.1
Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.848
AKL34971.1
Phage tail assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.845
selB
selenocysteinyl-tRNA-specific translation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.822
AKL34966.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.800
wecF
4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.
  
 0.788
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
  
 0.774
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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