Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AKL36425.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)    
Predicted Functional Partners:
AKL36426.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
lamB_4
Maltoporin; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.
  
  
 
0.654
AKL36427.1
Sugar hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.651
AKL38516.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
AKL34799.1
Maltoporin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.614
lamB
Maltoporin; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.
  
  
 
0.601
malM
Maltose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.599
AKL38737.1
LamB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.592
scrY_6
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.588
AKL37642.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.568
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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