Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKL36480.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
AKL36481.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.625
AKL34933.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.617
chiP
Chitoporin; Outer membrane porin involved in the transport of chitooligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
AKL36482.1
Magnesium ABC transporter ATPase; P-type; involved in magnesium transport into the cytoplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.585
AKL34613.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
AKL35284.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
AKL33594.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
AKL35743.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
AKL33927.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.544
AKL37180.1
Bacteriophage Lambda NinG protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.514
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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