Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKL35228.1 | artM_2 | AB185_15580 | AB185_19305 | Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.703 |
| AKL35228.1 | glnP | AB185_15580 | AB185_22780 | Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.916 |
| AKL35228.1 | glnQ | AB185_15580 | AB185_22775 | Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.706 |
| AKL35228.1 | glnQ-3 | AB185_15580 | AB185_27020 | Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.679 |
| AKL37265.1 | artJ_4 | AB185_26700 | AB185_26715 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.948 |
| AKL37265.1 | artM_2 | AB185_26700 | AB185_19305 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| AKL37265.1 | glnP | AB185_26700 | AB185_22780 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.974 |
| AKL37265.1 | glnQ | AB185_26700 | AB185_22775 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.753 |
| AKL37265.1 | glnQ-3 | AB185_26700 | AB185_27020 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.724 |
| artJ_4 | AKL37265.1 | AB185_26715 | AB185_26700 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.948 |
| artJ_4 | artM_2 | AB185_26715 | AB185_19305 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| artJ_4 | glnP | AB185_26715 | AB185_22780 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.978 |
| artJ_4 | glnQ | AB185_26715 | AB185_22775 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.752 |
| artJ_4 | glnQ-3 | AB185_26715 | AB185_27020 | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
| artM_2 | AKL35228.1 | AB185_19305 | AB185_15580 | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.703 |
| artM_2 | AKL37265.1 | AB185_19305 | AB185_26700 | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.764 |
| artM_2 | artJ_4 | AB185_19305 | AB185_26715 | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.768 |
| artM_2 | fliY_1 | AB185_19305 | AB185_17500 | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cystine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.768 |
| artM_2 | glnH | AB185_19305 | AB185_22785 | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine ABC transporter substrate-bindnig protein; Similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.778 |
| artM_2 | glnH-2 | AB185_19305 | AB185_27010 | Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamine ABC transporter substrate-bindnig protein; Similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. | 0.873 |
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