Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKL36875.1 | AKL36876.1 | AB185_24535 | AB185_24540 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
| AKL36875.1 | AKL37677.1 | AB185_24535 | AB185_28915 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| AKL36875.1 | AKL37931.1 | AB185_24535 | AB185_30235 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| AKL36875.1 | AKL37936.1 | AB185_24535 | AB185_30260 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.720 |
| AKL36875.1 | AKL37938.1 | AB185_24535 | AB185_30270 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.503 |
| AKL36875.1 | AKL37961.1 | AB185_24535 | AB185_30390 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.628 |
| AKL36875.1 | AKL37963.1 | AB185_24535 | AB185_30400 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. | 0.589 |
| AKL36875.1 | fecB | AB185_24535 | AB185_24545 | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron-dicitrate transporter substrate-binding subunit; Part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+); Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.700 |
| AKL36876.1 | AKL36875.1 | AB185_24540 | AB185_24535 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.935 |
| AKL36876.1 | AKL37677.1 | AB185_24540 | AB185_28915 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| AKL36876.1 | AKL37679.1 | AB185_24540 | AB185_28925 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lytic transglycosylase, catalytic; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.546 |
| AKL36876.1 | AKL37931.1 | AB185_24540 | AB185_30235 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.564 |
| AKL36876.1 | AKL37936.1 | AB185_24540 | AB185_30260 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.678 |
| AKL36876.1 | AKL37938.1 | AB185_24540 | AB185_30270 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
| AKL36876.1 | AKL37961.1 | AB185_24540 | AB185_30390 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.648 |
| AKL36876.1 | AKL37963.1 | AB185_24540 | AB185_30400 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. | 0.509 |
| AKL36876.1 | fecB | AB185_24540 | AB185_24545 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron-dicitrate transporter substrate-binding subunit; Part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+); Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.928 |
| AKL37677.1 | AKL36875.1 | AB185_28915 | AB185_24535 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron dicitrate transport regulator FecR; With FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
| AKL37677.1 | AKL36876.1 | AB185_28915 | AB185_24540 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |
| AKL37677.1 | AKL37679.1 | AB185_28915 | AB185_28925 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lytic transglycosylase, catalytic; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.947 |
page 1 of 4