Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cdaR_1 | degP | AB185_31035 | AB185_31040 | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine endoprotease; Protease Do; required at high temperature; degrades damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | 0.450 |
| cdaR_1 | glxK_2 | AB185_31035 | AB185_12790 | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family. | 0.400 |
| cdaR_1 | pgpB | AB185_31035 | AB185_23770 | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| cdaR_1 | yaeP | AB185_31035 | AB185_30890 | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0253 family. | 0.418 |
| degP | cdaR_1 | AB185_31040 | AB185_31035 | Serine endoprotease; Protease Do; required at high temperature; degrades damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| glxK_2 | cdaR_1 | AB185_12790 | AB185_31035 | Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family. | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
| pgpB | cdaR_1 | AB185_23770 | AB185_31035 | Phosphatidylglycerophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| yaeP | cdaR_1 | AB185_30890 | AB185_31035 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0253 family. | Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.418 |