Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKL33932.1 | AKL34228.1 | AB185_08495 | AB185_10120 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
| AKL33932.1 | AKL35291.1 | AB185_08495 | AB185_15900 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.739 |
| AKL33932.1 | AKL37371.1 | AB185_08495 | AB185_27265 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.520 |
| AKL33932.1 | AKL38296.1 | AB185_08495 | AB185_32245 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.615 |
| AKL33932.1 | bcsE | AB185_08495 | AB185_08455 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Required for cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.816 |
| AKL33932.1 | chbR | AB185_08495 | AB185_23990 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Represses the celABCDF-ydjC operon involved in carbon uptake; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.457 |
| AKL33932.1 | leuO-2 | AB185_08495 | AB185_31580 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Activator for leuABCD operon; member of LysR family of transcriptional activators; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.415 |
| AKL33932.1 | osmB | AB185_08495 | AB185_23745 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.706 |
| AKL33932.1 | sbmC | AB185_08495 | AB185_17070 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA gyrase inhibitor; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.583 |
| AKL33932.1 | yjjQ | AB185_08495 | AB185_32250 | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.598 |
| AKL34228.1 | AKL33932.1 | AB185_10120 | AB185_08495 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.712 |
| AKL34228.1 | AKL37371.1 | AB185_10120 | AB185_27265 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
| AKL34228.1 | AKL38296.1 | AB185_10120 | AB185_32245 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.658 |
| AKL34228.1 | bcsE | AB185_10120 | AB185_08455 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Required for cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.749 |
| AKL34228.1 | leuO-2 | AB185_10120 | AB185_31580 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Activator for leuABCD operon; member of LysR family of transcriptional activators; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. | 0.453 |
| AKL34228.1 | osmB | AB185_10120 | AB185_23745 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.759 |
| AKL34228.1 | sbmC | AB185_10120 | AB185_17070 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA gyrase inhibitor; Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell. | 0.573 |
| AKL34228.1 | yjjQ | AB185_10120 | AB185_32250 | Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.415 |
| AKL35291.1 | AKL33932.1 | AB185_15900 | AB185_08495 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.739 |
| AKL35291.1 | AKL37371.1 | AB185_15900 | AB185_27265 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.617 |
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