STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL98701.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
SDL98650.1
Uncharacterised nucleotidyltransferase.
 
     0.947
SDJ80656.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
 
   0.727
SDJ01666.1
DNA-binding transcriptional regulator, MarR family.
  
     0.720
SDL63953.1
Porin.
  
     0.700
SDI46632.1
Hypothetical protein.
  
     0.687
SDK73158.1
4Fe-4S single cluster domain of Ferredoxin I.
 
 
   0.675
SDK40570.1
Hypothetical protein.
  
     0.649
SDK57740.1
Hypothetical protein.
  
     0.648
SDI55970.1
Maltoporin.
  
     0.586
SDL42091.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.570
Your Current Organism:
Pseudoruegeria lutimaris
NCBI taxonomy Id: 571298
Other names: CCUG 57754, DSM 25294, KCTC 22690, P. lutimaris, Pseudoruegeria lutimaris Jung et al. 2010, Pseudoruegeria sp. HD-43, strain HD-43
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.