Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF10528.1 | SDF10556.1 | SAMN05192586_101244 | SAMN05192586_101245 | TonB C terminal. | TolA protein. | 0.609 |
SDF10528.1 | SDF10585.1 | SAMN05192586_101244 | SAMN05192586_101246 | TonB C terminal. | Cell division and transport-associated protein TolR. | 0.955 |
SDF10528.1 | SDF27819.1 | SAMN05192586_101244 | SAMN05192586_103127 | TonB C terminal. | Outer membrane transport energization protein ExbD. | 0.894 |
SDF10528.1 | SDF27855.1 | SAMN05192586_101244 | SAMN05192586_103128 | TonB C terminal. | Outer membrane transport energization protein ExbB. | 0.858 |
SDF10556.1 | SDF10528.1 | SAMN05192586_101245 | SAMN05192586_101244 | TolA protein. | TonB C terminal. | 0.609 |
SDF10556.1 | SDF10585.1 | SAMN05192586_101245 | SAMN05192586_101246 | TolA protein. | Cell division and transport-associated protein TolR. | 0.984 |
SDF10556.1 | SDF27819.1 | SAMN05192586_101245 | SAMN05192586_103127 | TolA protein. | Outer membrane transport energization protein ExbD. | 0.939 |
SDF10556.1 | SDF27855.1 | SAMN05192586_101245 | SAMN05192586_103128 | TolA protein. | Outer membrane transport energization protein ExbB. | 0.874 |
SDF10556.1 | SDF27924.1 | SAMN05192586_101245 | SAMN05192586_103130 | TolA protein. | 7, 8-dihydropterin-6-yl-methyl-4-(beta-D- ribofuranosyl)aminobenzene 5'-phosphate synthase. | 0.423 |
SDF10556.1 | SDF27963.1 | SAMN05192586_101245 | SAMN05192586_103131 | TolA protein. | Amino acid transporter, AAT family. | 0.433 |
SDF10585.1 | SDF10528.1 | SAMN05192586_101246 | SAMN05192586_101244 | Cell division and transport-associated protein TolR. | TonB C terminal. | 0.955 |
SDF10585.1 | SDF10556.1 | SAMN05192586_101246 | SAMN05192586_101245 | Cell division and transport-associated protein TolR. | TolA protein. | 0.984 |
SDF10585.1 | SDF27780.1 | SAMN05192586_101246 | SAMN05192586_103126 | Cell division and transport-associated protein TolR. | Hypothetical protein. | 0.894 |
SDF10585.1 | SDF27855.1 | SAMN05192586_101246 | SAMN05192586_103128 | Cell division and transport-associated protein TolR. | Outer membrane transport energization protein ExbB. | 0.947 |
SDF10585.1 | SDF83668.1 | SAMN05192586_101246 | SAMN05192586_11525 | Cell division and transport-associated protein TolR. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.942 |
SDF10585.1 | ribBA | SAMN05192586_101246 | SAMN05192586_10134 | Cell division and transport-associated protein TolR. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.664 |
SDF27780.1 | SDF10585.1 | SAMN05192586_103126 | SAMN05192586_101246 | Hypothetical protein. | Cell division and transport-associated protein TolR. | 0.894 |
SDF27780.1 | SDF27819.1 | SAMN05192586_103126 | SAMN05192586_103127 | Hypothetical protein. | Outer membrane transport energization protein ExbD. | 0.975 |
SDF27780.1 | SDF27855.1 | SAMN05192586_103126 | SAMN05192586_103128 | Hypothetical protein. | Outer membrane transport energization protein ExbB. | 0.966 |
SDF27780.1 | SDF27888.1 | SAMN05192586_103126 | SAMN05192586_103129 | Hypothetical protein. | GTPase, G3E family. | 0.791 |
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