STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF28106.1Pyruvate, water dikinase. (859 aa)    
Predicted Functional Partners:
SDF73165.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
    
 0.897
SDF28211.1
Pyruvate, water dikinase.
 
  
 
0.847
SDF28138.1
Response regulator receiver domain-containing protein.
 
  
  0.811
SDF28177.1
Two-component system, NtrC family, sensor kinase.
 
    0.786
SDF49738.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.785
SDF16908.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.775
SDF24866.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.730
SDF19462.1
D-lactate dehydrogenase.
    
 0.682
SDF44060.1
FAD/FMN-containing dehydrogenase.
    
 0.682
SDF55126.1
Phosphoenolpyruvate synthase.
 
  
 
0.668
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.