Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF16934.1 | SDF24708.1 | SAMN05192586_10295 | SAMN05192586_10324 | 8-amino-7-oxononanoate synthase. | Hypothetical protein. | 0.420 |
SDF24679.1 | SDF24708.1 | SAMN05192586_10323 | SAMN05192586_10324 | Hypothetical protein. | Hypothetical protein. | 0.587 |
SDF24708.1 | SDF16934.1 | SAMN05192586_10324 | SAMN05192586_10295 | Hypothetical protein. | 8-amino-7-oxononanoate synthase. | 0.420 |
SDF24708.1 | SDF24679.1 | SAMN05192586_10324 | SAMN05192586_10323 | Hypothetical protein. | Hypothetical protein. | 0.587 |
SDF24708.1 | SDF72460.1 | SAMN05192586_10324 | SAMN05192586_11161 | Hypothetical protein. | Glycine C-acetyltransferase/6-carboxyhexanoate--CoA ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.420 |
SDF24708.1 | SDF99582.1 | SAMN05192586_10324 | SAMN05192586_12229 | Hypothetical protein. | Inner membrane protein. | 0.494 |
SDF72460.1 | SDF24708.1 | SAMN05192586_11161 | SAMN05192586_10324 | Glycine C-acetyltransferase/6-carboxyhexanoate--CoA ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | Hypothetical protein. | 0.420 |
SDF99582.1 | SDF24708.1 | SAMN05192586_12229 | SAMN05192586_10324 | Inner membrane protein. | Hypothetical protein. | 0.494 |