STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF52295.1Isocitrate dehydrogenase (NADP). (380 aa)    
Predicted Functional Partners:
SDF52216.1
Aconitate hydratase.
  
 0.972
SDF73165.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.968
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
0.944
SDF48690.1
NADPH-dependent glutamate synthase beta chain.
     
 0.895
SDG04245.1
2-oxoglutarate ferredoxin oxidoreductase, delta subunit.
   
 
 0.807
SDF16505.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.790
SDF48656.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
    
 0.775
SDF35113.1
Succinate dehydrogenase subunit A.
  
 
 0.761
SDF73331.1
Succinate dehydrogenase subunit A.
  
 
 0.761
SDF78817.1
Dissimilatory adenylylsulfate reductase alpha subunit precursor.
  
 
 0.761
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.