STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF83817.1Sulfate permease, SulP family. (709 aa)    
Predicted Functional Partners:
SDF16908.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.939
SDF38393.1
DNA repair exonuclease SbcCD nuclease subunit.
  
   0.846
SDG04425.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
 
 0.841
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.816
SDF83846.1
tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
    0.802
SDF48690.1
NADPH-dependent glutamate synthase beta chain.
   
 
  0.716
SDF20047.1
Meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.713
SDF20904.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
 0.713
SDF46631.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
 0.713
SDF71133.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.713
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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