STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF84030.1Predicted glycoside hydrolase or deacetylase ChbG, UPF0249 family. (307 aa)    
Predicted Functional Partners:
SDF84057.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.813
SDF84097.1
Hypothetical protein.
       0.773
SDF17657.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
 
   
 0.724
SDF83994.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
       0.538
SDF52139.1
4-amino-4-deoxy-L-arabinose transferase.
 
  
 0.501
SDF56916.1
Tfp pilus assembly protein PilF.
  
     0.430
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.