STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF85284.12-oxoglutarate ferredoxin oxidoreductase subunit delta. (71 aa)    
Predicted Functional Partners:
SDF73165.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.976
SDF85320.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
 
 0.919
SDF85396.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 
 
 0.917
SDF85364.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 
 0.873
SDF48690.1
NADPH-dependent glutamate synthase beta chain.
  
 0.842
SDF61866.1
Fe-S oxidoreductase.
  
 0.774
SDF73197.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.694
SDG04213.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.669
SDF48656.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
    
 0.659
SDF38547.1
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
 
 
 0.656
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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