Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF86221.1 | SDF86279.1 | SAMN05192586_11633 | SAMN05192586_11635 | Ribosome-associated protein; Belongs to the UPF0307 family. | Glycine cleavage system transcriptional repressor. | 0.487 |
SDF86221.1 | SDF86305.1 | SAMN05192586_11633 | SAMN05192586_11636 | Ribosome-associated protein; Belongs to the UPF0307 family. | Hypothetical protein. | 0.489 |
SDF86221.1 | lysS | SAMN05192586_11633 | SAMN05192586_11634 | Ribosome-associated protein; Belongs to the UPF0307 family. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.803 |
SDF86279.1 | SDF86221.1 | SAMN05192586_11635 | SAMN05192586_11633 | Glycine cleavage system transcriptional repressor. | Ribosome-associated protein; Belongs to the UPF0307 family. | 0.487 |
SDF86279.1 | SDF86305.1 | SAMN05192586_11635 | SAMN05192586_11636 | Glycine cleavage system transcriptional repressor. | Hypothetical protein. | 0.888 |
SDF86279.1 | SDF86334.1 | SAMN05192586_11635 | SAMN05192586_11637 | Glycine cleavage system transcriptional repressor. | DNA-3-methyladenine glycosylase II. | 0.535 |
SDF86279.1 | lysS | SAMN05192586_11635 | SAMN05192586_11634 | Glycine cleavage system transcriptional repressor. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.487 |
SDF86305.1 | SDF86221.1 | SAMN05192586_11636 | SAMN05192586_11633 | Hypothetical protein. | Ribosome-associated protein; Belongs to the UPF0307 family. | 0.489 |
SDF86305.1 | SDF86279.1 | SAMN05192586_11636 | SAMN05192586_11635 | Hypothetical protein. | Glycine cleavage system transcriptional repressor. | 0.888 |
SDF86305.1 | SDF86334.1 | SAMN05192586_11636 | SAMN05192586_11637 | Hypothetical protein. | DNA-3-methyladenine glycosylase II. | 0.553 |
SDF86305.1 | gatB | SAMN05192586_11636 | SAMN05192586_10685 | Hypothetical protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.494 |
SDF86305.1 | lysS | SAMN05192586_11636 | SAMN05192586_11634 | Hypothetical protein. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.472 |
SDF86334.1 | SDF86279.1 | SAMN05192586_11637 | SAMN05192586_11635 | DNA-3-methyladenine glycosylase II. | Glycine cleavage system transcriptional repressor. | 0.535 |
SDF86334.1 | SDF86305.1 | SAMN05192586_11637 | SAMN05192586_11636 | DNA-3-methyladenine glycosylase II. | Hypothetical protein. | 0.553 |
gatB | SDF86305.1 | SAMN05192586_10685 | SAMN05192586_11636 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | Hypothetical protein. | 0.494 |
lysS | SDF86221.1 | SAMN05192586_11634 | SAMN05192586_11633 | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | Ribosome-associated protein; Belongs to the UPF0307 family. | 0.803 |
lysS | SDF86279.1 | SAMN05192586_11634 | SAMN05192586_11635 | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | Glycine cleavage system transcriptional repressor. | 0.487 |
lysS | SDF86305.1 | SAMN05192586_11634 | SAMN05192586_11636 | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.472 |