STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF89287.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (355 aa)    
Predicted Functional Partners:
SDF89266.1
Iron complex transport system ATP-binding protein.
 
 0.998
SDF89234.1
Iron complex transport system substrate-binding protein.
 
 0.997
SDF28926.1
Iron complex transport system ATP-binding protein.
 
 0.992
SDF28855.1
Iron complex transport system substrate-binding protein.
 
 0.974
SDF89199.1
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase.
  
    0.672
SDF75661.1
uroporphyrinogen-III synthase.
  
  
 0.607
SDF24326.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
  
 0.530
SDF89356.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.422
SDF06942.1
iron(III) transport system permease protein.
  
  
 0.418
SDF28783.1
Iron complex outermembrane recepter protein.
 
  
 0.414
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.