STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF89548.1Type I restriction enzyme, S subunit. (557 aa)    
Predicted Functional Partners:
SDF89582.1
Type I restriction enzyme M protein.
 
 0.999
SDF89614.1
Type I restriction enzyme, R subunit.
 
 
 0.993
SDF84473.1
Type III restriction enzyme, res subunit.
  
  
 0.879
SDF89489.1
Uncharacterized conserved protein.
  
    0.879
SDF89515.1
Zn-dependent peptidase ImmA, M78 family.
 
     0.843
SDF51999.1
Protein of unknown function DUF262.
  
    0.786
SDF48015.1
DNA polymerase I.
   
 
 0.766
SDF59541.1
Predicted transcriptional regulator, contains HTH domain.
 
    0.690
SDF30112.1
Fe-S-cluster-containing dehydrogenase component.
    
 
 0.676
atpF
ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.676
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.