STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF98973.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (778 aa)    
Predicted Functional Partners:
SDF62340.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.999
SDF34542.1
Signal transduction histidine kinase.
 
 0.998
SDF62078.1
Two-component system, unclassified family, sensor histidine kinase and response regulator.
  
 0.998
SDF88933.1
Signal transduction histidine kinase.
 
 0.998
SDF93578.1
Signal transduction histidine kinase.
 
 0.998
SDF14330.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.997
SDF83463.1
Hypothetical protein.
 
 0.997
SDF68022.1
Polar amino acid transport system substrate-binding protein.
 
 0.996
SDF91590.1
Hypothetical protein.
  
 0.996
SDF55242.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.994
Your Current Organism:
Desulfovibrio legallii
NCBI taxonomy Id: 571438
Other names: CCUG 54389, D. legallii, DSM 19129, Desulfovibrio legallii corrig. Thabet et al. 2013, Desulfovibrio legallis, Desulfovibrio sp. H1, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.