STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU16797.1Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
AKU16798.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.847
AKU16799.1
Glucoamylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
AKU16903.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
AKU16796.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.594
AKU18148.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
AKU18936.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
whiA
Sporulation protein; Involved in cell division and chromosome segregation.
  
  
 0.494
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
  
    0.483
AKU18937.1
glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities.
       0.475
Your Current Organism:
Luteipulveratus mongoliensis
NCBI taxonomy Id: 571913
Other names: Dermacoccaceae bacterium MN07-A0370, L. mongoliensis, Luteipulveratus mongoliensis Ara et al. 2010, NBRC 105296, VTCC D9-09, strain MN07-A0370
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.