STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ83117.1HDIG domain-containing protein. (296 aa)    
Predicted Functional Partners:
SEA52439.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.960
SEA06886.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
  
 0.876
SEA17501.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.876
SEA17468.1
EAL domain-containing protein.
 
  
 0.819
SEB03195.1
Flagellar motor switch protein FliN/FliY.
  
 
 0.818
SEA47661.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase /chorismate mutase.
 
  
 0.805
SEA49328.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.781
SEB13987.1
Osmoprotectant transport system permease protein.
    
 0.779
SEA40380.1
Signal transduction histidine kinase.
 
   
 0.720
SEA73390.1
Signal transduction histidine kinase.
 
   
 0.720
Your Current Organism:
Thalassobacillus cyri
NCBI taxonomy Id: 571932
Other names: CCM 7597, JCM 15722, T. cyri, Thalassobacillus cyri Sanchez-Porro et al. 2009, Thalassobacillus sp. HS286, strain HS286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.