STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ76041.1Dehydrogenase (flavoprotein). (362 aa)    
Predicted Functional Partners:
SEB10880.1
Ferredoxin like protein.
  
 
 0.832
SEA73743.1
Glycine/D-amino acid oxidase.
  
 
 0.712
SEB13462.1
Glycine/D-amino acid oxidase.
  
 
 0.712
SEB10857.1
Electron transfer flavoprotein alpha subunit.
  
 
 0.598
SEA51193.1
Electron transfer flavoprotein beta subunit.
  
 
 0.589
SEA80789.1
Electron transfer flavoprotein beta subunit.
  
 
 0.589
SEB10845.1
Electron transfer flavoprotein beta subunit.
  
 
 0.589
SEB14683.1
Electron transfer flavoprotein beta subunit.
  
 
 0.589
SEA61558.1
Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.576
SEB12946.1
Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family.
  
 0.576
Your Current Organism:
Thalassobacillus cyri
NCBI taxonomy Id: 571932
Other names: CCM 7597, JCM 15722, T. cyri, Thalassobacillus cyri Sanchez-Porro et al. 2009, Thalassobacillus sp. HS286, strain HS286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.