STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA04715.1DinB superfamily protein. (156 aa)    
Predicted Functional Partners:
SEB20533.1
Sporulation lipoprotein, YhcN/YlaJ family.
  
     0.581
SEB07543.1
Hypothetical protein.
  
     0.556
SEA04657.1
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
       0.534
SEA04686.1
AhpC/TSA family protein.
       0.534
SEB08994.1
IDEAL domain-containing protein.
  
     0.495
SEB18154.1
Glyoxalase-like domain-containing protein.
  
     0.492
SEA71978.1
Acetyltransferase (GNAT) family protein.
  
    0.484
SDZ83006.1
Protein of unknown function.
  
     0.466
SEB20472.1
ABC-2 family transporter protein.
  
     0.466
SEB02451.1
Aspartate kinase; Belongs to the aspartokinase family.
     
 0.460
Your Current Organism:
Thalassobacillus cyri
NCBI taxonomy Id: 571932
Other names: CCM 7597, JCM 15722, T. cyri, Thalassobacillus cyri Sanchez-Porro et al. 2009, Thalassobacillus sp. HS286, strain HS286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.