STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA06664.1GntR family transcriptional regulator, trehalose operon transcriptional repressor. (224 aa)    
Predicted Functional Partners:
SEA06518.1
PTS system, trehalose-specific IIC component.
 
  
 0.913
SEA37990.1
PTS system, sucrose-specific IIC component.
 
  
 0.747
SEA03009.1
GntR family transcriptional regulator.
  
     0.725
SEA06582.1
Trehalose-6-phosphate hydrolase.
 
  
 0.669
SDZ85178.1
PTS system, beta-glucosides-specific IIC component.
 
  
 0.653
SEA06477.1
PTS system, glucose-specific IIA component.
 
   
 0.585
SEB16620.1
PTS system, D-glucosamine-specific IIC component.
 
  
 0.517
SEB00763.1
Pyruvate ferredoxin oxidoreductase alpha subunit.
    
  0.497
SEB02000.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.497
SEA79337.1
DNA-binding transcriptional regulator, FadR family.
  
    0.496
Your Current Organism:
Thalassobacillus cyri
NCBI taxonomy Id: 571932
Other names: CCM 7597, JCM 15722, T. cyri, Thalassobacillus cyri Sanchez-Porro et al. 2009, Thalassobacillus sp. HS286, strain HS286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.