STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA21994.1Glutaconate CoA-transferase subunit A. (304 aa)    
Predicted Functional Partners:
SEA21945.1
Glutaconate CoA-transferase subunit B.
 0.998
SEA24351.1
3-oxoacid CoA-transferase subunit B.
  
 0.947
SEA32594.1
3-oxoacid CoA-transferase/3-oxoacid CoA-transferase subunit B.
  
 0.947
SEA80636.1
3-oxoacid CoA-transferase subunit B.
  
 0.947
SEB07659.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.736
SEA21903.1
acyl-CoA thioester hydrolase.
       0.712
SEA22033.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.697
SEA91082.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase.
  
 
 0.691
SEA91111.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase.
  
 
 0.691
SEA91135.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase.
  
 
 0.691
Your Current Organism:
Thalassobacillus cyri
NCBI taxonomy Id: 571932
Other names: CCM 7597, JCM 15722, T. cyri, Thalassobacillus cyri Sanchez-Porro et al. 2009, Thalassobacillus sp. HS286, strain HS286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.