STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selDSelenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. (322 aa)    
Predicted Functional Partners:
selA
L-seryl-tRNA(Ser) seleniumtransferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.970
SEB18085.1
NADH dehydrogenase, FAD-containing subunit.
 
   
  0.938
SEA99172.1
tRNA 2-selenouridine synthase.
 
  
 0.928
SEB15456.1
Selenocysteine-specific elongation factor.
 
   
 0.837
SEA95169.1
Cysteine desulfurase.
   
 0.782
SEA48146.1
Cysteine desulfurase.
   
 0.748
SEB18284.1
Glutaredoxin.
     
 0.718
SDZ95968.1
Cysteine desulfurase family protein.
  
 0.710
SDZ82710.1
L-2,4-diaminobutyrate decarboxylase.
     
 0.671
SEA06886.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
    
  0.660
Your Current Organism:
Thalassobacillus cyri
NCBI taxonomy Id: 571932
Other names: CCM 7597, JCM 15722, T. cyri, Thalassobacillus cyri Sanchez-Porro et al. 2009, Thalassobacillus sp. HS286, strain HS286
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