STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP57067.1Type III secretion system ATPase, FliI/YscN. (440 aa)    
Predicted Functional Partners:
SEP57040.1
Flagellar assembly protein FliH.
 
 
 0.999
SEP57353.1
Flagellar motor switch protein FliN/FliY.
 
 
 0.999
SEP57016.1
Flagellar motor switch protein FliG.
 
 0.997
SEP56993.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.996
SEP57095.1
Flagellar FliJ protein.
  
 
 0.993
SEP57329.1
Flagellar motor switch protein FliM.
 
  
 0.991
SEP56941.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.989
fliE
Flagellar hook-basal body complex protein FliE.
 
  
 0.987
SEP56920.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.985
SEQ25033.1
Flagellar protein FliS.
 
 
 0.982
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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