Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP78599.1 | SEP78641.1 | SAMN05216362_10312 | SAMN05216362_10313 | Hypothetical protein. | Hypothetical protein. | 0.445 |
SEP78599.1 | SEP78701.1 | SAMN05216362_10312 | SAMN05216362_10314 | Hypothetical protein. | ABC-2 family transporter protein. | 0.412 |
SEP78599.1 | SEP78738.1 | SAMN05216362_10312 | SAMN05216362_10315 | Hypothetical protein. | ABC-2 family transporter protein. | 0.412 |
SEP78599.1 | SEP78900.1 | SAMN05216362_10312 | SAMN05216362_10319 | Hypothetical protein. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.447 |
SEP78599.1 | sigI | SAMN05216362_10312 | SAMN05216362_10311 | Hypothetical protein. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. | 0.991 |
SEP78641.1 | SEP78599.1 | SAMN05216362_10313 | SAMN05216362_10312 | Hypothetical protein. | Hypothetical protein. | 0.445 |
SEP78641.1 | SEP78701.1 | SAMN05216362_10313 | SAMN05216362_10314 | Hypothetical protein. | ABC-2 family transporter protein. | 0.727 |
SEP78641.1 | SEP78738.1 | SAMN05216362_10313 | SAMN05216362_10315 | Hypothetical protein. | ABC-2 family transporter protein. | 0.713 |
SEP78641.1 | SEP78773.1 | SAMN05216362_10313 | SAMN05216362_10316 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.668 |
SEP78641.1 | SEP78817.1 | SAMN05216362_10313 | SAMN05216362_10317 | Hypothetical protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.668 |
SEP78641.1 | SEP78855.1 | SAMN05216362_10313 | SAMN05216362_10318 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.635 |
SEP78641.1 | SEP78900.1 | SAMN05216362_10313 | SAMN05216362_10319 | Hypothetical protein. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.452 |
SEP78641.1 | sigI | SAMN05216362_10313 | SAMN05216362_10311 | Hypothetical protein. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. | 0.445 |
SEP78701.1 | SEP78599.1 | SAMN05216362_10314 | SAMN05216362_10312 | ABC-2 family transporter protein. | Hypothetical protein. | 0.412 |
SEP78701.1 | SEP78641.1 | SAMN05216362_10314 | SAMN05216362_10313 | ABC-2 family transporter protein. | Hypothetical protein. | 0.727 |
SEP78701.1 | SEP78738.1 | SAMN05216362_10314 | SAMN05216362_10315 | ABC-2 family transporter protein. | ABC-2 family transporter protein. | 0.789 |
SEP78701.1 | SEP78773.1 | SAMN05216362_10314 | SAMN05216362_10316 | ABC-2 family transporter protein. | ABC-2 type transport system ATP-binding protein. | 0.799 |
SEP78701.1 | SEP78817.1 | SAMN05216362_10314 | SAMN05216362_10317 | ABC-2 family transporter protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.747 |
SEP78701.1 | SEP78855.1 | SAMN05216362_10314 | SAMN05216362_10318 | ABC-2 family transporter protein. | Two component transcriptional regulator, LuxR family. | 0.691 |
SEP78701.1 | SEP78900.1 | SAMN05216362_10314 | SAMN05216362_10319 | ABC-2 family transporter protein. | Sporulation lipoprotein, YhcN/YlaJ family. | 0.489 |
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