STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP79775.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
SEP79734.1
L-amino acid N-acyltransferase YncA.
       0.470
SEP79642.1
4-azaleucine resistance probable transporter AzlC.
       0.445
SEP79677.1
Branched-chain amino acid transport protein (AzlD).
       0.445
SEP79817.1
IDEAL domain-containing protein.
       0.435
SEP79607.1
Iron complex transport system substrate-binding protein.
       0.414
SEP79556.1
Chromate transporter.
       0.403
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.