STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP91581.1Multisubunit sodium/proton antiporter, MrpE subunit. (158 aa)    
Predicted Functional Partners:
SEP91469.1
Multisubunit sodium/proton antiporter, MrpA subunit.
 
 
 0.999
SEP91507.1
Multisubunit sodium/proton antiporter, MrpC subunit.
 
 
 0.999
SEP91544.1
Multisubunit sodium/proton antiporter, MrpD subunit.
 
 
 0.999
SEP91615.1
Multisubunit sodium/proton antiporter, MrpF subunit.
 
 
 0.999
SEP91656.1
Multisubunit sodium/proton antiporter, MrpG subunit.
 
 
 0.999
SEP60464.1
Multisubunit sodium/proton antiporter, MrpB subunit.
 
 
 0.995
SEQ34321.1
NAD(P)H-quinone oxidoreductase subunit 5.
 
 
 0.911
SEP91689.1
RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.507
SEP91425.1
Developmental checkpoint coupling sporulation initiation to replication initiation.
       0.453
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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