STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ06195.1Two-component signal transduction system YycFG, regulatory protein YycI. (304 aa)    
Predicted Functional Partners:
SEQ06234.1
Two-component signal transduction system YycFG, regulatory protein YycH.
 
  
 0.977
SEQ06153.1
Phosphoribosyl 1,2-cyclic phosphodiesterase.
  
  
 0.881
SEQ06274.1
PAS/PAC sensor signal transduction histidine kinase.
  
  
 0.856
SEQ06309.1
Two-component system, OmpR family, response regulator VicR.
  
  
 0.780
SEP91799.1
Protein of unknown function.
  
     0.770
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.762
SEQ06118.1
Serine protease Do.
  
    0.760
SEP81996.1
Competence protein ComK.
  
     0.753
SER21264.1
Hypothetical protein.
  
     0.747
SEP94450.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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