STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ30003.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SEQ72969.1
YtpI-like protein.
  
     0.756
SEP67789.1
Protein of unknown function.
  
     0.753
SEQ86448.1
Hypothetical protein.
  
     0.730
SER12211.1
KinB signaling pathway activation protein.
  
     0.703
SEP54974.1
YugN-like family protein.
  
     0.684
SEP84141.1
Protein of unknown function.
  
     0.680
SEQ30045.1
Protein of unknown function.
       0.680
SEP72372.1
Protein of unknown function.
  
     0.648
SEP55008.1
Hypothetical protein.
  
     0.647
SEQ09360.1
Inhibitor of the pro-sigma K processing machinery.
  
     0.634
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.