STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ37079.1YtoQ family protein. (146 aa)    
Predicted Functional Partners:
SEQ37123.1
Hypothetical protein.
       0.603
SEQ37167.1
Hypothetical protein.
       0.542
SEQ80294.1
YtkA-like.
  
     0.539
SEQ14915.1
5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
  0.513
SEQ29281.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.
    
  0.509
SEQ45076.1
YtkA-like.
  
     0.498
SEP68381.1
Hypothetical protein.
  
     0.433
SEQ37211.1
Uncharacterized protein YtpQ, UPF0354 family; Belongs to the UPF0354 family.
     
 0.433
SEP74505.1
Protein of unknown function.
  
     0.426
SEP54974.1
YugN-like family protein.
  
     0.425
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.