Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEP65689.1 | SEP67875.1 | SAMN05216362_10228 | SAMN05216362_10272 | Putative peptidoglycan binding domain-containing protein. | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 0.443 |
| SEP65689.1 | SEQ37387.1 | SAMN05216362_10228 | SAMN05216362_11229 | Putative peptidoglycan binding domain-containing protein. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.717 |
| SEP67875.1 | SEP65689.1 | SAMN05216362_10272 | SAMN05216362_10228 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Putative peptidoglycan binding domain-containing protein. | 0.443 |
| SEP67875.1 | SEP93827.1 | SAMN05216362_10272 | SAMN05216362_104126 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Diguanylate cyclase with GAF sensor. | 0.846 |
| SEP67875.1 | SEQ14915.1 | SAMN05216362_10272 | SAMN05216362_10766 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.455 |
| SEP67875.1 | SEQ14964.1 | SAMN05216362_10272 | SAMN05216362_10767 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.843 |
| SEP67875.1 | SEQ37387.1 | SAMN05216362_10272 | SAMN05216362_11229 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.713 |
| SEP67875.1 | SEQ41090.1 | SAMN05216362_10272 | SAMN05216362_11314 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | Hypothetical protein. | 0.823 |
| SEP67875.1 | guaA | SAMN05216362_10272 | SAMN05216362_1044 | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.563 |
| SEP93827.1 | SEP67875.1 | SAMN05216362_104126 | SAMN05216362_10272 | Diguanylate cyclase with GAF sensor. | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 0.846 |
| SEP93827.1 | SEQ14915.1 | SAMN05216362_104126 | SAMN05216362_10766 | Diguanylate cyclase with GAF sensor. | 5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.501 |
| SEP93827.1 | SEQ14964.1 | SAMN05216362_104126 | SAMN05216362_10767 | Diguanylate cyclase with GAF sensor. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.974 |
| SEP93827.1 | SEQ37387.1 | SAMN05216362_104126 | SAMN05216362_11229 | Diguanylate cyclase with GAF sensor. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.790 |
| SEP93827.1 | SEQ41090.1 | SAMN05216362_104126 | SAMN05216362_11314 | Diguanylate cyclase with GAF sensor. | Hypothetical protein. | 0.723 |
| SEP93827.1 | guaA | SAMN05216362_104126 | SAMN05216362_1044 | Diguanylate cyclase with GAF sensor. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.749 |
| SEQ14915.1 | SEP67875.1 | SAMN05216362_10766 | SAMN05216362_10272 | 5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain. | 0.455 |
| SEQ14915.1 | SEP93827.1 | SAMN05216362_10766 | SAMN05216362_104126 | 5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Diguanylate cyclase with GAF sensor. | 0.501 |
| SEQ14915.1 | SEQ14964.1 | SAMN05216362_10766 | SAMN05216362_10767 | 5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.709 |
| SEQ14915.1 | SEQ37387.1 | SAMN05216362_10766 | SAMN05216362_11229 | 5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.776 |
| SEQ14915.1 | SEQ41090.1 | SAMN05216362_10766 | SAMN05216362_11314 | 5'-nucleotidase/2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Hypothetical protein. | 0.501 |
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