STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ67736.1Subtilase family protein; Belongs to the peptidase S8 family. (486 aa)    
Predicted Functional Partners:
SER04438.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat; Belongs to the peptidase S8 family.
  
     0.739
SEQ62263.1
PA domain-containing protein; Belongs to the peptidase S8 family.
  
     0.706
SEQ90096.1
Bacillopeptidase F.
  
    0.698
SEQ18416.1
Lamin Tail Domain.
  
    0.598
SEP85551.1
Bacillopeptidase F. Serine peptidase. MEROPS family S08A.
  
    0.525
SEP85645.1
Double zinc ribbon.
   
  0.451
SEP56659.1
Hypothetical protein.
   
  0.427
SEQ45587.1
Protein of unknown function.
   
  0.427
SEQ78290.1
Hypothetical protein.
   
  0.427
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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