STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ78213.1Heat induced stress protein YflT. (114 aa)    
Predicted Functional Partners:
SER13654.1
Transglycosylase associated protein.
 
    0.672
SEQ96776.1
Uncharacterized protein YdaT.
  
    0.650
SEQ95322.1
Peroxiredoxin, Ohr subfamily.
   
    0.633
SEQ87152.1
Protein required for attachment to host cells.
  
    0.603
SER22600.1
EcsC protein family protein.
  
     0.588
rsbW
Serine/threonine-protein kinase RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
  
  
 0.586
SEQ08993.1
Protease I.
   
  
 0.567
SER23199.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
    0.563
SEQ78177.1
Heat induced stress protein YflT.
      
0.543
SEP71139.1
Arginine utilization protein RocB.
  
     0.536
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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