Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP86208.1 | SEQ80467.1 | SAMN05216362_103184 | SAMN05216362_1289 | GerA spore germination protein. | Spore germination protein. | 0.435 |
SEQ40925.1 | SEQ80467.1 | SAMN05216362_11310 | SAMN05216362_1289 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Spore germination protein. | 0.609 |
SEQ44917.1 | SEQ80467.1 | SAMN05216362_11421 | SAMN05216362_1289 | Spore germination protein KA. | Spore germination protein. | 0.401 |
SEQ49583.1 | SEQ80467.1 | SAMN05216362_11545 | SAMN05216362_1289 | peptidoglycan-N-acetylmuramic acid deacetylase. | Spore germination protein. | 0.819 |
SEQ80330.1 | SEQ80364.1 | SAMN05216362_1285 | SAMN05216362_1286 | Transcriptional regulator, GntR family. | ABC-2 type transport system ATP-binding protein. | 0.953 |
SEQ80330.1 | SEQ80389.1 | SAMN05216362_1285 | SAMN05216362_1287 | Transcriptional regulator, GntR family. | Hypothetical protein. | 0.785 |
SEQ80330.1 | SEQ80412.1 | SAMN05216362_1285 | SAMN05216362_1288 | Transcriptional regulator, GntR family. | Hypothetical protein. | 0.773 |
SEQ80330.1 | SEQ80467.1 | SAMN05216362_1285 | SAMN05216362_1289 | Transcriptional regulator, GntR family. | Spore germination protein. | 0.565 |
SEQ80364.1 | SEQ80330.1 | SAMN05216362_1286 | SAMN05216362_1285 | ABC-2 type transport system ATP-binding protein. | Transcriptional regulator, GntR family. | 0.953 |
SEQ80364.1 | SEQ80389.1 | SAMN05216362_1286 | SAMN05216362_1287 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.785 |
SEQ80364.1 | SEQ80412.1 | SAMN05216362_1286 | SAMN05216362_1288 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.773 |
SEQ80364.1 | SEQ80467.1 | SAMN05216362_1286 | SAMN05216362_1289 | ABC-2 type transport system ATP-binding protein. | Spore germination protein. | 0.565 |
SEQ80389.1 | SEQ80330.1 | SAMN05216362_1287 | SAMN05216362_1285 | Hypothetical protein. | Transcriptional regulator, GntR family. | 0.785 |
SEQ80389.1 | SEQ80364.1 | SAMN05216362_1287 | SAMN05216362_1286 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.785 |
SEQ80389.1 | SEQ80412.1 | SAMN05216362_1287 | SAMN05216362_1288 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEQ80389.1 | SEQ80467.1 | SAMN05216362_1287 | SAMN05216362_1289 | Hypothetical protein. | Spore germination protein. | 0.565 |
SEQ80412.1 | SEQ80330.1 | SAMN05216362_1288 | SAMN05216362_1285 | Hypothetical protein. | Transcriptional regulator, GntR family. | 0.773 |
SEQ80412.1 | SEQ80364.1 | SAMN05216362_1288 | SAMN05216362_1286 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.773 |
SEQ80412.1 | SEQ80389.1 | SAMN05216362_1288 | SAMN05216362_1287 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEQ80412.1 | SEQ80467.1 | SAMN05216362_1288 | SAMN05216362_1289 | Hypothetical protein. | Spore germination protein. | 0.565 |
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