STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER01857.1Two component transcriptional regulator, LytTR family. (232 aa)    
Predicted Functional Partners:
SEQ90458.1
Two-component system, LytT family, sensor histidine kinase LytS.
 
 0.949
SER01817.1
Two-component system, LytT family, sensor histidine kinase NatK.
 
  
 0.911
SER01757.1
Protein of unknown function.
  
    0.718
SER01714.1
Putative acetyltransferase.
       0.676
SER01902.1
Sodium transport system ATP-binding protein.
 
     0.609
SEQ41893.1
Two-component system, CitB family, response regulator CitT.
  
  
 0.574
SER01939.1
Sodium transport system permease protein.
       0.550
SEQ41852.1
Two-component system, CitB family, sensor histidine kinase CitS.
 
  
 0.425
SER01980.1
Putative small multi-drug export protein.
       0.413
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.