STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER08552.1Transcriptional regulator, TetR family. (201 aa)    
Predicted Functional Partners:
SER08504.1
Sap, sulfolipid-1-addressing protein.
 
     0.854
SEQ88334.1
Iron (metal) dependent repressor, DtxR family.
   
    0.549
SER08468.1
Hypothetical protein.
       0.527
SEQ48832.1
Hypothetical protein.
   
    0.523
SER08426.1
Fucose 4-O-acetylase.
 
     0.459
SEQ41288.1
Phosphate transport system protein; Plays a role in the regulation of phosphate uptake.
   
    0.445
SEQ88470.1
Transcriptional regulator, PaaX family.
  
    0.431
SER08590.1
Hypothetical protein.
       0.410
SER08634.1
GrpB protein.
       0.410
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.