STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER13619.1Lipid kinase, YegS/Rv2252/BmrU family. (299 aa)    
Predicted Functional Partners:
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
   
  0.935
SEQ36704.1
Lipid kinase, YegS/Rv2252/BmrU family.
  
 
  0.877
SEQ77270.1
Glycosyl transferase family 2.
   
 
 0.660
SEQ77315.1
Glycosyl transferase family 2.
   
 
 0.660
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.621
SEQ81164.1
Undecaprenyl-diphosphatase.
 
 
 0.607
SEP58117.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
  
 0.606
SER13654.1
Transglycosylase associated protein.
  
    0.575
SEP89699.1
Undecaprenol kinase.
     
 0.545
SEQ15086.1
PGAP1-like protein.
     
 0.525
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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