STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER29078.1N-acetylmuramoyl-L-alanine amidase. (346 aa)    
Predicted Functional Partners:
SER12330.1
N-acetylmuramoyl-L-alanine amidase.
  
 0.947
SEQ33715.1
N-acetylmuramoyl-L-alanine amidase.
 
0.921
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 
 0.912
SEQ37581.1
Cell division protein FtsA.
   
 
 0.896
SEQ20406.1
Penicillin-binding protein, 1A family.
 
 
 0.876
SEQ37922.1
Penicillin-binding protein.
 
 
 0.876
SEP81457.1
Penicillin-binding protein 2A.
 
 
 0.874
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
 
 0.863
SEP66527.1
Penicillin-binding protein 1A.
   
 0.854
SEP68799.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.828
Your Current Organism:
Piscibacillus halophilus
NCBI taxonomy Id: 571933
Other names: CCM 7596, DSM 21633, JCM 15721, LMG 24786, LMG:24786, P. halophilus, Piscibacillus halophilus Amoozegar et al. 2009, Piscibacillus sp. HS224, strain HS224
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