Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB28736.1 | SKB28745.1 | SAMN05661099_0192 | SAMN05661099_0193 | Threonine/homoserine/homoserine lactone efflux protein. | MFS transporter, FHS family, L-fucose permease. | 0.476 |
SKB28736.1 | SKB28750.1 | SAMN05661099_0192 | SAMN05661099_0194 | Threonine/homoserine/homoserine lactone efflux protein. | dCMP deaminase. | 0.621 |
SKB28745.1 | SKB28736.1 | SAMN05661099_0193 | SAMN05661099_0192 | MFS transporter, FHS family, L-fucose permease. | Threonine/homoserine/homoserine lactone efflux protein. | 0.476 |
SKB28745.1 | SKB28750.1 | SAMN05661099_0193 | SAMN05661099_0194 | MFS transporter, FHS family, L-fucose permease. | dCMP deaminase. | 0.794 |
SKB28745.1 | SKB28774.1 | SAMN05661099_0193 | SAMN05661099_0195 | MFS transporter, FHS family, L-fucose permease. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family. | 0.538 |
SKB28745.1 | SKB43834.1 | SAMN05661099_0193 | SAMN05661099_1446 | MFS transporter, FHS family, L-fucose permease. | L-rhamnose mutarotase. | 0.445 |
SKB28745.1 | SKB67717.1 | SAMN05661099_0193 | SAMN05661099_2192 | MFS transporter, FHS family, L-fucose permease. | Biopolymer transport protein ExbD. | 0.411 |
SKB28750.1 | SKB28736.1 | SAMN05661099_0194 | SAMN05661099_0192 | dCMP deaminase. | Threonine/homoserine/homoserine lactone efflux protein. | 0.621 |
SKB28750.1 | SKB28745.1 | SAMN05661099_0194 | SAMN05661099_0193 | dCMP deaminase. | MFS transporter, FHS family, L-fucose permease. | 0.794 |
SKB28750.1 | SKB28774.1 | SAMN05661099_0194 | SAMN05661099_0195 | dCMP deaminase. | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family. | 0.538 |
SKB28774.1 | SKB28745.1 | SAMN05661099_0195 | SAMN05661099_0193 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family. | MFS transporter, FHS family, L-fucose permease. | 0.538 |
SKB28774.1 | SKB28750.1 | SAMN05661099_0195 | SAMN05661099_0194 | 4-hydroxy-3-polyprenylbenzoate decarboxylase; Belongs to the UbiD family. | dCMP deaminase. | 0.538 |
SKB43834.1 | SKB28745.1 | SAMN05661099_1446 | SAMN05661099_0193 | L-rhamnose mutarotase. | MFS transporter, FHS family, L-fucose permease. | 0.445 |
SKB67717.1 | SKB28745.1 | SAMN05661099_2192 | SAMN05661099_0193 | Biopolymer transport protein ExbD. | MFS transporter, FHS family, L-fucose permease. | 0.411 |