STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB29186.1Lipoprotein-releasing system permease protein. (406 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 0.983
SKB38574.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.956
SKB75741.1
Lipoprotein-releasing system permease protein.
  
  
 
0.918
SKB31273.1
Putative ABC transport system ATP-binding protein.
 
 
 0.908
SKB49646.1
Putative ABC transport system ATP-binding protein.
 
 
 0.908
SKB74680.1
Putative ABC transport system ATP-binding protein.
 
 
 0.888
SKB31344.1
ABC-type lipoprotein export system, ATPase component.
 
 
 0.880
SKB42466.1
Putative ABC transport system ATP-binding protein.
 
 
 0.880
SKB28591.1
Beta-barrel assembly machine subunit BamA.
 
   
 0.718
SKB73127.1
Hypothetical protein.
  
     0.701
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.