Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB29434.1 | SKB30704.1 | SAMN05661099_0267 | SAMN05661099_0396 | Predicted dehydrogenase. | Protein of unknown function. | 0.765 |
SKB29434.1 | SKB94472.1 | SAMN05661099_0267 | SAMN05661099_3623 | Predicted dehydrogenase. | Protein of unknown function. | 0.661 |
SKB30704.1 | SKB29434.1 | SAMN05661099_0396 | SAMN05661099_0267 | Protein of unknown function. | Predicted dehydrogenase. | 0.765 |
SKB30704.1 | SKB30715.1 | SAMN05661099_0396 | SAMN05661099_0397 | Protein of unknown function. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.682 |
SKB30704.1 | SKB31886.1 | SAMN05661099_0396 | SAMN05661099_0505 | Protein of unknown function. | Predicted dehydrogenase. | 0.746 |
SKB30704.1 | SKB35341.1 | SAMN05661099_0396 | SAMN05661099_0815 | Protein of unknown function. | Predicted dehydrogenase. | 0.762 |
SKB30704.1 | SKB35351.1 | SAMN05661099_0396 | SAMN05661099_0816 | Protein of unknown function. | Protein of unknown function. | 0.765 |
SKB30704.1 | SKB76177.1 | SAMN05661099_0396 | SAMN05661099_2686 | Protein of unknown function. | Predicted dehydrogenase. | 0.743 |
SKB30704.1 | SKB89279.1 | SAMN05661099_0396 | SAMN05661099_3323 | Protein of unknown function. | Hypothetical protein. | 0.759 |
SKB30704.1 | SKB89298.1 | SAMN05661099_0396 | SAMN05661099_3325 | Protein of unknown function. | Choline dehydrogenase. | 0.630 |
SKB30704.1 | SKB94472.1 | SAMN05661099_0396 | SAMN05661099_3623 | Protein of unknown function. | Protein of unknown function. | 0.926 |
SKB30704.1 | efp | SAMN05661099_0396 | SAMN05661099_2412 | Protein of unknown function. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.883 |
SKB30715.1 | SKB30704.1 | SAMN05661099_0397 | SAMN05661099_0396 | Oxidoreductase family, NAD-binding Rossmann fold. | Protein of unknown function. | 0.682 |
SKB30715.1 | SKB31886.1 | SAMN05661099_0397 | SAMN05661099_0505 | Oxidoreductase family, NAD-binding Rossmann fold. | Predicted dehydrogenase. | 0.722 |
SKB30715.1 | SKB76177.1 | SAMN05661099_0397 | SAMN05661099_2686 | Oxidoreductase family, NAD-binding Rossmann fold. | Predicted dehydrogenase. | 0.733 |
SKB31886.1 | SKB30704.1 | SAMN05661099_0505 | SAMN05661099_0396 | Predicted dehydrogenase. | Protein of unknown function. | 0.746 |
SKB31886.1 | SKB30715.1 | SAMN05661099_0505 | SAMN05661099_0397 | Predicted dehydrogenase. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.722 |
SKB31886.1 | SKB35351.1 | SAMN05661099_0505 | SAMN05661099_0816 | Predicted dehydrogenase. | Protein of unknown function. | 0.573 |
SKB31886.1 | SKB94472.1 | SAMN05661099_0505 | SAMN05661099_3623 | Predicted dehydrogenase. | Protein of unknown function. | 0.724 |
SKB35341.1 | SKB30704.1 | SAMN05661099_0815 | SAMN05661099_0396 | Predicted dehydrogenase. | Protein of unknown function. | 0.762 |
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