STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB31939.1N-acetylglucosamine-6-phosphate deacetylase. (396 aa)    
Predicted Functional Partners:
SKB31962.1
Glucosamine-6-phosphate deaminase.
 0.995
SKB83129.1
Glucosamine-6-phosphate deaminase.
 0.978
SKB75911.1
Glucosamine-6-phosphate deaminase.
 0.973
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.937
SKB92184.1
Glucosamine-6-phosphate deaminase.
 
 0.921
SKB30780.1
N-acetylmuramic acid 6-phosphate etherase.
  
 0.902
SKB82626.1
BadF-type ATPase.
    
 0.901
SKB69266.1
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 
0.844
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.837
SKB30686.1
Neutral/alkaline non-lysosomal ceramidase, N-terminal.
  
 0.755
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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