Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB34692.1 | SKB34743.1 | SAMN05661099_0758 | SAMN05661099_0759 | PASTA domain-containing protein. | Rhodanese-related sulfurtransferase. | 0.835 |
SKB34692.1 | SKB34759.1 | SAMN05661099_0758 | SAMN05661099_0761 | PASTA domain-containing protein. | acyl-CoA thioester hydrolase. | 0.812 |
SKB34692.1 | SKB34766.1 | SAMN05661099_0758 | SAMN05661099_0762 | PASTA domain-containing protein. | Membrane protein. | 0.826 |
SKB34692.1 | ddl | SAMN05661099_0758 | SAMN05661099_0757 | PASTA domain-containing protein. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.755 |
SKB34692.1 | mltG | SAMN05661099_0758 | SAMN05661099_0760 | PASTA domain-containing protein. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.884 |
SKB34743.1 | SKB34692.1 | SAMN05661099_0759 | SAMN05661099_0758 | Rhodanese-related sulfurtransferase. | PASTA domain-containing protein. | 0.835 |
SKB34743.1 | SKB34759.1 | SAMN05661099_0759 | SAMN05661099_0761 | Rhodanese-related sulfurtransferase. | acyl-CoA thioester hydrolase. | 0.773 |
SKB34743.1 | SKB34766.1 | SAMN05661099_0759 | SAMN05661099_0762 | Rhodanese-related sulfurtransferase. | Membrane protein. | 0.773 |
SKB34743.1 | acpP | SAMN05661099_0759 | SAMN05661099_2242 | Rhodanese-related sulfurtransferase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.447 |
SKB34743.1 | ddl | SAMN05661099_0759 | SAMN05661099_0757 | Rhodanese-related sulfurtransferase. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.546 |
SKB34743.1 | mltG | SAMN05661099_0759 | SAMN05661099_0760 | Rhodanese-related sulfurtransferase. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.774 |
SKB34759.1 | SKB34692.1 | SAMN05661099_0761 | SAMN05661099_0758 | acyl-CoA thioester hydrolase. | PASTA domain-containing protein. | 0.812 |
SKB34759.1 | SKB34743.1 | SAMN05661099_0761 | SAMN05661099_0759 | acyl-CoA thioester hydrolase. | Rhodanese-related sulfurtransferase. | 0.773 |
SKB34759.1 | SKB34766.1 | SAMN05661099_0761 | SAMN05661099_0762 | acyl-CoA thioester hydrolase. | Membrane protein. | 0.843 |
SKB34759.1 | SKB75821.1 | SAMN05661099_0761 | SAMN05661099_2649 | acyl-CoA thioester hydrolase. | [acyl-carrier-protein] S-malonyltransferase. | 0.677 |
SKB34759.1 | SKB82790.1 | SAMN05661099_0761 | SAMN05661099_2969 | acyl-CoA thioester hydrolase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.612 |
SKB34759.1 | acpP | SAMN05661099_0761 | SAMN05661099_2242 | acyl-CoA thioester hydrolase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.416 |
SKB34759.1 | ddl | SAMN05661099_0761 | SAMN05661099_0757 | acyl-CoA thioester hydrolase. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.562 |
SKB34759.1 | lpxC | SAMN05661099_0761 | SAMN05661099_2415 | acyl-CoA thioester hydrolase. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.543 |
SKB34759.1 | mltG | SAMN05661099_0761 | SAMN05661099_0760 | acyl-CoA thioester hydrolase. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.843 |
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