STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB36060.1Electron transfer flavoprotein alpha subunit apoprotein. (325 aa)    
Predicted Functional Partners:
SKB36053.1
Electron transfer flavoprotein beta subunit.
 0.999
SKB27895.1
Acyl-CoA dehydrogenase.
 0.998
SKB70429.1
Acyl-CoA dehydrogenase.
 0.998
SKB42829.1
glutaryl-CoA dehydrogenase.
 0.997
SKB82847.1
Acyl-CoA dehydrogenase.
 0.994
SKB52579.1
D-lactate dehydrogenase.
  
 
 0.887
SKB91214.1
N-ethylmaleimide reductase.
   
 
 0.877
SKB42690.1
Glycolate oxidase.
 
 
 0.875
SKB82790.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.855
SKB36068.1
Hypothetical protein.
 
     0.766
Your Current Organism:
Pedobacter luteus
NCBI taxonomy Id: 572036
Other names: DSM 22385, KCTC 22699, P. luteus, Pedobacter luteus Oh et al. 2013, Pedobacter sp. B4a-b5, Pedobacter sp. N7d-4, strain N7d-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.