Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SKB27283.1 | SKB41304.1 | SAMN05661099_0045 | SAMN05661099_1217 | Adenylyltransferase and sulfurtransferase. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.545 |
SKB27283.1 | SKB82148.1 | SAMN05661099_0045 | SAMN05661099_2930 | Adenylyltransferase and sulfurtransferase. | Hypothetical protein. | 0.578 |
SKB37672.1 | SKB41304.1 | SAMN05661099_0977 | SAMN05661099_1217 | Hypothetical protein. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.557 |
SKB41304.1 | SKB27283.1 | SAMN05661099_1217 | SAMN05661099_0045 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Adenylyltransferase and sulfurtransferase. | 0.545 |
SKB41304.1 | SKB37672.1 | SAMN05661099_1217 | SAMN05661099_0977 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Hypothetical protein. | 0.557 |
SKB41304.1 | SKB41316.1 | SAMN05661099_1217 | SAMN05661099_1218 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Response regulator receiver domain-containing protein. | 0.491 |
SKB41304.1 | SKB45982.1 | SAMN05661099_1217 | SAMN05661099_1547 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.456 |
SKB41304.1 | SKB48712.1 | SAMN05661099_1217 | SAMN05661099_1626 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Protein of unknown function. | 0.434 |
SKB41304.1 | SKB73012.1 | SAMN05661099_1217 | SAMN05661099_2452 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Hypothetical protein. | 0.516 |
SKB41304.1 | SKB73418.1 | SAMN05661099_1217 | SAMN05661099_2486 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | 0.440 |
SKB41304.1 | SKB82148.1 | SAMN05661099_1217 | SAMN05661099_2930 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Hypothetical protein. | 0.427 |
SKB41304.1 | SKB86621.1 | SAMN05661099_1217 | SAMN05661099_3165 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Hypothetical protein. | 0.476 |
SKB41304.1 | ribBA | SAMN05661099_1217 | SAMN05661099_3093 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.479 |
SKB41316.1 | SKB41304.1 | SAMN05661099_1218 | SAMN05661099_1217 | Response regulator receiver domain-containing protein. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.491 |
SKB41316.1 | ribBA | SAMN05661099_1218 | SAMN05661099_3093 | Response regulator receiver domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.744 |
SKB45982.1 | SKB41304.1 | SAMN05661099_1547 | SAMN05661099_1217 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.456 |
SKB45982.1 | ribBA | SAMN05661099_1547 | SAMN05661099_3093 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.548 |
SKB48712.1 | SKB41304.1 | SAMN05661099_1626 | SAMN05661099_1217 | Protein of unknown function. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.434 |
SKB73012.1 | SKB41304.1 | SAMN05661099_2452 | SAMN05661099_1217 | Hypothetical protein. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.516 |
SKB73418.1 | SKB41304.1 | SAMN05661099_2486 | SAMN05661099_1217 | Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.440 |
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